Instructions for downloading ADMIXMAP and HAPMIXMAP source code held in the Subversion repository.
Refer to the INSTALL and README documents for instructions on compilation and running.
First, you will need a Subversion client. If you are using Unix/Linux you probably already have svn installed. To check type
svn --version
If you are using Cygwin, you can request an installation of svn via the update program. There is currently no MinGW port.
Instructions for command-line clients (Unix/Linux/Cygwin)
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In a shell, navigate to a convenient location where you want to place the source code. Suppose you want to call the directory 'genepi', then type:
svn
export https://pm2.phs.ed.ac.uk/svn/genepi/trunk genepi
This will download the source without the version-control data.
If you want to do development work on the code, instead type
svn checkout https://pm2.phs.ed.ac.uk/svn/genepi/trunk genepi
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There are various graphical clients available for Windows including RapidSVN (http://www.rapidsvn.org/index.php/Main_Page),
SubCommander (http://subcommander.tigris.org/) and TortoiseSVN (http://tortoisesvn.tigris.org/). Some specific instructions for these are included below.
Instructions for RapidSVN
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In the Bookmarks menu, select 'Add Existing repository' and enter the url: https://pm2.phs.ed.ac.uk/svn/genepi/trunk
This will add a 'bookmark' for the svn repository.
Next download the contents: Select the bookmark you just created.
If you want to do development work on the code, right-click and select 'Checkout new Working Copy'. Alternatively, select Checkout from the Repository menu or simply press CTRL-O.
Otherwise, select 'Export' from the repository menu or press CTRL-E.
Enter the url again (it might be available in the drop-down box) then enter the location where you want to place a local copy of the repository. Ensure 'Use latest', 'Add To BookMarks' and 'Recursive' are ticked and click 'OK'.
Refer to the Help for information on further repository operations.
Instructions for SubCommander
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In the Project menu, select 'New Project' and enter the name 'genepi'. Right-click the project name and select 'New Repository'. Give it a name if you wish and enter the url: https://pm2.phs.ed.ac.uk/svn/genepi/trunk.
Click on the + symbol next to genepi to expand and reveal the entry for the repository.
If you want to do development work on the code, right-click and select checkout, or press CTRL+SHIFT+C.
Otherwise, click on '.' at the top of the right-hand-pane and select export from the Repos menu.
Enter the working copy path (where the files will be downloaded to) and click 'OK'.
Refer to the Help for information on further repository operations.
Instructions for TortoiseSVN
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