athina spiliopoulou
Software
- GENOSCORES
a platform for calculating genotypic predictors of human traits
Genoscores is a database of published genotype-phenotype associations from a large number of well-powered genome-wide association studies, including disease traits and biomarkers. The database is accompanied by an R package implementing score computation and downstream statistical analyses for cohorts with genotype (SNP) data. - GeneImp
fast imputation from ultra-low coverage sequencing
GeneImp is an R package that implements genotype imputation to a dense reference panel given genotype likelihoods computed from ultra-low coverage DNA sequencing.